High Performance Computing Resources

Linux

• Common Administrative Commands in Red Hat Enterprise Linux 5,6,7, and 8
• Red Hat Enterprise 7 Linux System Administrator’s Guide
• CentOS Wiki
• Purdue ITaP Unix 101, Unix 201, Unix 101 booklet
• Swcarpentry The Unix Shell
• The Linux Documentation Project
• Nano, Overview of Nano Keystrokes
• Vim
• Emacs
• ASCII Table
• UTF-8 Encoding Table and Unicode Characters
• Regular Expression
  • Regrex101
• grep, awk, sed

Research Computing Clusters

• Purdue Clusters 101

MPI

• MPI Forum
• Open MPI

Slurm

• Slurm Documentation
• Slurm Tutorials
• Running Jobs

Applications

• Matlab
• Python
  • Documentation
  • The Python Tutorial
  • PyViz
  • Style Guide for Python Code
  • pythex
  • Helpful Books
    • Whirlwind Tour of Python
    • Python Data Science Handbook
    • Effective Computation in Physics Field Guide to Research with Python
    • Fluent Python
    • …
• R
• ParaView
• …

Data Management

• DataDirect Networks (DDN®) Storage
• lustre
• IBM Spectrum Scale (GPFS)
• Globus Overview

Gateway

• Open OnDemand

Git

• Git Documentation
• Git Command List

Others

• XSEDE
• Cornell Virtual Workshop
• National Library of Medicine
• National Center for Biotechnology Information
• Purdue Library Guides
• Datasets @PURR

More resources to be added…